tenax Search Results


tenax  (ATCC)
94
ATCC tenax
Tenax, supplied by ATCC, used in various techniques. Bioz Stars score: 94/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Average 94 stars, based on 1 article reviews
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thermoproteus tenax  (ATCC)
92
ATCC thermoproteus tenax
Multiple amino acid sequence alignment of KDGA from P. torridus and its homologs in T. acidophilum and T. volcanii with archaeal bifunctional KD(P)GA, NAL of E. coli, and DHDPS of E. coli. The alignment was generated with ClustalX using the gonnet matrix. Consensus patterns (DHDPS_1 and DHDPS_2) are boxed. The dihydrodipicolinate synthetase family signature 1 consensus pattern is [GSA]-[LIVM]-[LIVMFY]-x(2)-G-[ST]-[TG]-G-E-[GASNF]-x(6)-[EQ] (PS00665), and the dihydrodipicolinate synthetase family signature 2 consensus pattern is Y-[DNSAH]-[LIVMFAN]-P-x(2)-[STAV]-x(2,3)-[LIVMFT]-x(13,14)-[LIVMCF]-x-[SGA]-[LIVMFNS]-K-[DEQAFYH]-[STACI] (PS00666). Signature 2 consensus pattern includes a lysine (marked by an arrow) which is involved in Schiff base formation. Catalytic residues (▾) and residues forming a putative phosphate-binding motif (#) for KDP according to references 16, 27, and 30 are indicated. Pto-KDGA, KDGA of P. torridus; Tac-KDGA and Tvo-KDGA, homologs of Pto-KDGA in T. acidophilum and T. volcanii Ta1157 and TVN1228; Sso-KD(P)GA, S. solfataricus gi:2879782; Tte-KD(P)GA, T. <t>tenax</t> gi:41033593; Eco-NAL, gi:128526; Eco-DHDPS, gi:145708.
Thermoproteus Tenax, supplied by ATCC, used in various techniques. Bioz Stars score: 92/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Average 92 stars, based on 1 article reviews
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tenax ta 60 80  (Revvity)
90
Revvity tenax ta 60 80
Multiple amino acid sequence alignment of KDGA from P. torridus and its homologs in T. acidophilum and T. volcanii with archaeal bifunctional KD(P)GA, NAL of E. coli, and DHDPS of E. coli. The alignment was generated with ClustalX using the gonnet matrix. Consensus patterns (DHDPS_1 and DHDPS_2) are boxed. The dihydrodipicolinate synthetase family signature 1 consensus pattern is [GSA]-[LIVM]-[LIVMFY]-x(2)-G-[ST]-[TG]-G-E-[GASNF]-x(6)-[EQ] (PS00665), and the dihydrodipicolinate synthetase family signature 2 consensus pattern is Y-[DNSAH]-[LIVMFAN]-P-x(2)-[STAV]-x(2,3)-[LIVMFT]-x(13,14)-[LIVMCF]-x-[SGA]-[LIVMFNS]-K-[DEQAFYH]-[STACI] (PS00666). Signature 2 consensus pattern includes a lysine (marked by an arrow) which is involved in Schiff base formation. Catalytic residues (▾) and residues forming a putative phosphate-binding motif (#) for KDP according to references 16, 27, and 30 are indicated. Pto-KDGA, KDGA of P. torridus; Tac-KDGA and Tvo-KDGA, homologs of Pto-KDGA in T. acidophilum and T. volcanii Ta1157 and TVN1228; Sso-KD(P)GA, S. solfataricus gi:2879782; Tte-KD(P)GA, T. <t>tenax</t> gi:41033593; Eco-NAL, gi:128526; Eco-DHDPS, gi:145708.
Tenax Ta 60 80, supplied by Revvity, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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stainless steel atd prepacked tenax ta tubes  (Revvity)
90
Revvity stainless steel atd prepacked tenax ta tubes
Multiple amino acid sequence alignment of KDGA from P. torridus and its homologs in T. acidophilum and T. volcanii with archaeal bifunctional KD(P)GA, NAL of E. coli, and DHDPS of E. coli. The alignment was generated with ClustalX using the gonnet matrix. Consensus patterns (DHDPS_1 and DHDPS_2) are boxed. The dihydrodipicolinate synthetase family signature 1 consensus pattern is [GSA]-[LIVM]-[LIVMFY]-x(2)-G-[ST]-[TG]-G-E-[GASNF]-x(6)-[EQ] (PS00665), and the dihydrodipicolinate synthetase family signature 2 consensus pattern is Y-[DNSAH]-[LIVMFAN]-P-x(2)-[STAV]-x(2,3)-[LIVMFT]-x(13,14)-[LIVMCF]-x-[SGA]-[LIVMFNS]-K-[DEQAFYH]-[STACI] (PS00666). Signature 2 consensus pattern includes a lysine (marked by an arrow) which is involved in Schiff base formation. Catalytic residues (▾) and residues forming a putative phosphate-binding motif (#) for KDP according to references 16, 27, and 30 are indicated. Pto-KDGA, KDGA of P. torridus; Tac-KDGA and Tvo-KDGA, homologs of Pto-KDGA in T. acidophilum and T. volcanii Ta1157 and TVN1228; Sso-KD(P)GA, S. solfataricus gi:2879782; Tte-KD(P)GA, T. <t>tenax</t> gi:41033593; Eco-NAL, gi:128526; Eco-DHDPS, gi:145708.
Stainless Steel Atd Prepacked Tenax Ta Tubes, supplied by Revvity, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Average 90 stars, based on 1 article reviews
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stainless steel tenax gr 60 80 packed thermal desorption td  (Revvity)
91
Revvity stainless steel tenax gr 60 80 packed thermal desorption td
Multiple amino acid sequence alignment of KDGA from P. torridus and its homologs in T. acidophilum and T. volcanii with archaeal bifunctional KD(P)GA, NAL of E. coli, and DHDPS of E. coli. The alignment was generated with ClustalX using the gonnet matrix. Consensus patterns (DHDPS_1 and DHDPS_2) are boxed. The dihydrodipicolinate synthetase family signature 1 consensus pattern is [GSA]-[LIVM]-[LIVMFY]-x(2)-G-[ST]-[TG]-G-E-[GASNF]-x(6)-[EQ] (PS00665), and the dihydrodipicolinate synthetase family signature 2 consensus pattern is Y-[DNSAH]-[LIVMFAN]-P-x(2)-[STAV]-x(2,3)-[LIVMFT]-x(13,14)-[LIVMCF]-x-[SGA]-[LIVMFNS]-K-[DEQAFYH]-[STACI] (PS00666). Signature 2 consensus pattern includes a lysine (marked by an arrow) which is involved in Schiff base formation. Catalytic residues (▾) and residues forming a putative phosphate-binding motif (#) for KDP according to references 16, 27, and 30 are indicated. Pto-KDGA, KDGA of P. torridus; Tac-KDGA and Tvo-KDGA, homologs of Pto-KDGA in T. acidophilum and T. volcanii Ta1157 and TVN1228; Sso-KD(P)GA, S. solfataricus gi:2879782; Tte-KD(P)GA, T. <t>tenax</t> gi:41033593; Eco-NAL, gi:128526; Eco-DHDPS, gi:145708.
Stainless Steel Tenax Gr 60 80 Packed Thermal Desorption Td, supplied by Revvity, used in various techniques. Bioz Stars score: 91/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Average 91 stars, based on 1 article reviews
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91/100 stars
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stainless steel tenax ta  (Revvity)
91
Revvity stainless steel tenax ta
Multiple amino acid sequence alignment of KDGA from P. torridus and its homologs in T. acidophilum and T. volcanii with archaeal bifunctional KD(P)GA, NAL of E. coli, and DHDPS of E. coli. The alignment was generated with ClustalX using the gonnet matrix. Consensus patterns (DHDPS_1 and DHDPS_2) are boxed. The dihydrodipicolinate synthetase family signature 1 consensus pattern is [GSA]-[LIVM]-[LIVMFY]-x(2)-G-[ST]-[TG]-G-E-[GASNF]-x(6)-[EQ] (PS00665), and the dihydrodipicolinate synthetase family signature 2 consensus pattern is Y-[DNSAH]-[LIVMFAN]-P-x(2)-[STAV]-x(2,3)-[LIVMFT]-x(13,14)-[LIVMCF]-x-[SGA]-[LIVMFNS]-K-[DEQAFYH]-[STACI] (PS00666). Signature 2 consensus pattern includes a lysine (marked by an arrow) which is involved in Schiff base formation. Catalytic residues (▾) and residues forming a putative phosphate-binding motif (#) for KDP according to references 16, 27, and 30 are indicated. Pto-KDGA, KDGA of P. torridus; Tac-KDGA and Tvo-KDGA, homologs of Pto-KDGA in T. acidophilum and T. volcanii Ta1157 and TVN1228; Sso-KD(P)GA, S. solfataricus gi:2879782; Tte-KD(P)GA, T. <t>tenax</t> gi:41033593; Eco-NAL, gi:128526; Eco-DHDPS, gi:145708.
Stainless Steel Tenax Ta, supplied by Revvity, used in various techniques. Bioz Stars score: 91/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Average 91 stars, based on 1 article reviews
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91/100 stars
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thermoproteus tenax atcc 35583  (ATCC)
91
ATCC thermoproteus tenax atcc 35583
Multiple amino acid sequence alignment of KDGA from P. torridus and its homologs in T. acidophilum and T. volcanii with archaeal bifunctional KD(P)GA, NAL of E. coli, and DHDPS of E. coli. The alignment was generated with ClustalX using the gonnet matrix. Consensus patterns (DHDPS_1 and DHDPS_2) are boxed. The dihydrodipicolinate synthetase family signature 1 consensus pattern is [GSA]-[LIVM]-[LIVMFY]-x(2)-G-[ST]-[TG]-G-E-[GASNF]-x(6)-[EQ] (PS00665), and the dihydrodipicolinate synthetase family signature 2 consensus pattern is Y-[DNSAH]-[LIVMFAN]-P-x(2)-[STAV]-x(2,3)-[LIVMFT]-x(13,14)-[LIVMCF]-x-[SGA]-[LIVMFNS]-K-[DEQAFYH]-[STACI] (PS00666). Signature 2 consensus pattern includes a lysine (marked by an arrow) which is involved in Schiff base formation. Catalytic residues (▾) and residues forming a putative phosphate-binding motif (#) for KDP according to references 16, 27, and 30 are indicated. Pto-KDGA, KDGA of P. torridus; Tac-KDGA and Tvo-KDGA, homologs of Pto-KDGA in T. acidophilum and T. volcanii Ta1157 and TVN1228; Sso-KD(P)GA, S. solfataricus gi:2879782; Tte-KD(P)GA, T. <t>tenax</t> gi:41033593; Eco-NAL, gi:128526; Eco-DHDPS, gi:145708.
Thermoproteus Tenax Atcc 35583, supplied by ATCC, used in various techniques. Bioz Stars score: 91/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Average 91 stars, based on 1 article reviews
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91/100 stars
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genomic dna  (ATCC)
90
ATCC genomic dna
Multiple amino acid sequence alignment of KDGA from P. torridus and its homologs in T. acidophilum and T. volcanii with archaeal bifunctional KD(P)GA, NAL of E. coli, and DHDPS of E. coli. The alignment was generated with ClustalX using the gonnet matrix. Consensus patterns (DHDPS_1 and DHDPS_2) are boxed. The dihydrodipicolinate synthetase family signature 1 consensus pattern is [GSA]-[LIVM]-[LIVMFY]-x(2)-G-[ST]-[TG]-G-E-[GASNF]-x(6)-[EQ] (PS00665), and the dihydrodipicolinate synthetase family signature 2 consensus pattern is Y-[DNSAH]-[LIVMFAN]-P-x(2)-[STAV]-x(2,3)-[LIVMFT]-x(13,14)-[LIVMCF]-x-[SGA]-[LIVMFNS]-K-[DEQAFYH]-[STACI] (PS00666). Signature 2 consensus pattern includes a lysine (marked by an arrow) which is involved in Schiff base formation. Catalytic residues (▾) and residues forming a putative phosphate-binding motif (#) for KDP according to references 16, 27, and 30 are indicated. Pto-KDGA, KDGA of P. torridus; Tac-KDGA and Tvo-KDGA, homologs of Pto-KDGA in T. acidophilum and T. volcanii Ta1157 and TVN1228; Sso-KD(P)GA, S. solfataricus gi:2879782; Tte-KD(P)GA, T. <t>tenax</t> gi:41033593; Eco-NAL, gi:128526; Eco-DHDPS, gi:145708.
Genomic Dna, supplied by ATCC, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Average 90 stars, based on 1 article reviews
genomic dna - by Bioz Stars, 2026-05
90/100 stars
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t tenax dsm2078t  (DSMZ)
90
DSMZ t tenax dsm2078t
Multiple amino acid sequence alignment of KDGA from P. torridus and its homologs in T. acidophilum and T. volcanii with archaeal bifunctional KD(P)GA, NAL of E. coli, and DHDPS of E. coli. The alignment was generated with ClustalX using the gonnet matrix. Consensus patterns (DHDPS_1 and DHDPS_2) are boxed. The dihydrodipicolinate synthetase family signature 1 consensus pattern is [GSA]-[LIVM]-[LIVMFY]-x(2)-G-[ST]-[TG]-G-E-[GASNF]-x(6)-[EQ] (PS00665), and the dihydrodipicolinate synthetase family signature 2 consensus pattern is Y-[DNSAH]-[LIVMFAN]-P-x(2)-[STAV]-x(2,3)-[LIVMFT]-x(13,14)-[LIVMCF]-x-[SGA]-[LIVMFNS]-K-[DEQAFYH]-[STACI] (PS00666). Signature 2 consensus pattern includes a lysine (marked by an arrow) which is involved in Schiff base formation. Catalytic residues (▾) and residues forming a putative phosphate-binding motif (#) for KDP according to references 16, 27, and 30 are indicated. Pto-KDGA, KDGA of P. torridus; Tac-KDGA and Tvo-KDGA, homologs of Pto-KDGA in T. acidophilum and T. volcanii Ta1157 and TVN1228; Sso-KD(P)GA, S. solfataricus gi:2879782; Tte-KD(P)GA, T. <t>tenax</t> gi:41033593; Eco-NAL, gi:128526; Eco-DHDPS, gi:145708.
T Tenax Dsm2078t, supplied by DSMZ, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Average 90 stars, based on 1 article reviews
t tenax dsm2078t - by Bioz Stars, 2026-05
90/100 stars
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oxygen delivery  (Tenax Therapeutics)
90
Tenax Therapeutics oxygen delivery
Multiple amino acid sequence alignment of KDGA from P. torridus and its homologs in T. acidophilum and T. volcanii with archaeal bifunctional KD(P)GA, NAL of E. coli, and DHDPS of E. coli. The alignment was generated with ClustalX using the gonnet matrix. Consensus patterns (DHDPS_1 and DHDPS_2) are boxed. The dihydrodipicolinate synthetase family signature 1 consensus pattern is [GSA]-[LIVM]-[LIVMFY]-x(2)-G-[ST]-[TG]-G-E-[GASNF]-x(6)-[EQ] (PS00665), and the dihydrodipicolinate synthetase family signature 2 consensus pattern is Y-[DNSAH]-[LIVMFAN]-P-x(2)-[STAV]-x(2,3)-[LIVMFT]-x(13,14)-[LIVMCF]-x-[SGA]-[LIVMFNS]-K-[DEQAFYH]-[STACI] (PS00666). Signature 2 consensus pattern includes a lysine (marked by an arrow) which is involved in Schiff base formation. Catalytic residues (▾) and residues forming a putative phosphate-binding motif (#) for KDP according to references 16, 27, and 30 are indicated. Pto-KDGA, KDGA of P. torridus; Tac-KDGA and Tvo-KDGA, homologs of Pto-KDGA in T. acidophilum and T. volcanii Ta1157 and TVN1228; Sso-KD(P)GA, S. solfataricus gi:2879782; Tte-KD(P)GA, T. <t>tenax</t> gi:41033593; Eco-NAL, gi:128526; Eco-DHDPS, gi:145708.
Oxygen Delivery, supplied by Tenax Therapeutics, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Average 90 stars, based on 1 article reviews
oxygen delivery - by Bioz Stars, 2026-05
90/100 stars
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tenax ta  (Markes International)
90
Markes International tenax ta
Multiple amino acid sequence alignment of KDGA from P. torridus and its homologs in T. acidophilum and T. volcanii with archaeal bifunctional KD(P)GA, NAL of E. coli, and DHDPS of E. coli. The alignment was generated with ClustalX using the gonnet matrix. Consensus patterns (DHDPS_1 and DHDPS_2) are boxed. The dihydrodipicolinate synthetase family signature 1 consensus pattern is [GSA]-[LIVM]-[LIVMFY]-x(2)-G-[ST]-[TG]-G-E-[GASNF]-x(6)-[EQ] (PS00665), and the dihydrodipicolinate synthetase family signature 2 consensus pattern is Y-[DNSAH]-[LIVMFAN]-P-x(2)-[STAV]-x(2,3)-[LIVMFT]-x(13,14)-[LIVMCF]-x-[SGA]-[LIVMFNS]-K-[DEQAFYH]-[STACI] (PS00666). Signature 2 consensus pattern includes a lysine (marked by an arrow) which is involved in Schiff base formation. Catalytic residues (▾) and residues forming a putative phosphate-binding motif (#) for KDP according to references 16, 27, and 30 are indicated. Pto-KDGA, KDGA of P. torridus; Tac-KDGA and Tvo-KDGA, homologs of Pto-KDGA in T. acidophilum and T. volcanii Ta1157 and TVN1228; Sso-KD(P)GA, S. solfataricus gi:2879782; Tte-KD(P)GA, T. <t>tenax</t> gi:41033593; Eco-NAL, gi:128526; Eco-DHDPS, gi:145708.
Tenax Ta, supplied by Markes International, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Average 90 stars, based on 1 article reviews
tenax ta - by Bioz Stars, 2026-05
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tenax fiber trans drill  (Coltene Whaledent)
90
Coltene Whaledent tenax fiber trans drill
Multiple amino acid sequence alignment of KDGA from P. torridus and its homologs in T. acidophilum and T. volcanii with archaeal bifunctional KD(P)GA, NAL of E. coli, and DHDPS of E. coli. The alignment was generated with ClustalX using the gonnet matrix. Consensus patterns (DHDPS_1 and DHDPS_2) are boxed. The dihydrodipicolinate synthetase family signature 1 consensus pattern is [GSA]-[LIVM]-[LIVMFY]-x(2)-G-[ST]-[TG]-G-E-[GASNF]-x(6)-[EQ] (PS00665), and the dihydrodipicolinate synthetase family signature 2 consensus pattern is Y-[DNSAH]-[LIVMFAN]-P-x(2)-[STAV]-x(2,3)-[LIVMFT]-x(13,14)-[LIVMCF]-x-[SGA]-[LIVMFNS]-K-[DEQAFYH]-[STACI] (PS00666). Signature 2 consensus pattern includes a lysine (marked by an arrow) which is involved in Schiff base formation. Catalytic residues (▾) and residues forming a putative phosphate-binding motif (#) for KDP according to references 16, 27, and 30 are indicated. Pto-KDGA, KDGA of P. torridus; Tac-KDGA and Tvo-KDGA, homologs of Pto-KDGA in T. acidophilum and T. volcanii Ta1157 and TVN1228; Sso-KD(P)GA, S. solfataricus gi:2879782; Tte-KD(P)GA, T. <t>tenax</t> gi:41033593; Eco-NAL, gi:128526; Eco-DHDPS, gi:145708.
Tenax Fiber Trans Drill, supplied by Coltene Whaledent, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Image Search Results


Multiple amino acid sequence alignment of KDGA from P. torridus and its homologs in T. acidophilum and T. volcanii with archaeal bifunctional KD(P)GA, NAL of E. coli, and DHDPS of E. coli. The alignment was generated with ClustalX using the gonnet matrix. Consensus patterns (DHDPS_1 and DHDPS_2) are boxed. The dihydrodipicolinate synthetase family signature 1 consensus pattern is [GSA]-[LIVM]-[LIVMFY]-x(2)-G-[ST]-[TG]-G-E-[GASNF]-x(6)-[EQ] (PS00665), and the dihydrodipicolinate synthetase family signature 2 consensus pattern is Y-[DNSAH]-[LIVMFAN]-P-x(2)-[STAV]-x(2,3)-[LIVMFT]-x(13,14)-[LIVMCF]-x-[SGA]-[LIVMFNS]-K-[DEQAFYH]-[STACI] (PS00666). Signature 2 consensus pattern includes a lysine (marked by an arrow) which is involved in Schiff base formation. Catalytic residues (▾) and residues forming a putative phosphate-binding motif (#) for KDP according to references 16, 27, and 30 are indicated. Pto-KDGA, KDGA of P. torridus; Tac-KDGA and Tvo-KDGA, homologs of Pto-KDGA in T. acidophilum and T. volcanii Ta1157 and TVN1228; Sso-KD(P)GA, S. solfataricus gi:2879782; Tte-KD(P)GA, T. tenax gi:41033593; Eco-NAL, gi:128526; Eco-DHDPS, gi:145708.

Journal: Journal of Bacteriology

Article Title: The Nonphosphorylative Entner-Doudoroff Pathway in the Thermoacidophilic Euryarchaeon Picrophilus torridus Involves a Novel 2-Keto-3-Deoxygluconate- Specific Aldolase ▿

doi: 10.1128/JB.01281-09

Figure Lengend Snippet: Multiple amino acid sequence alignment of KDGA from P. torridus and its homologs in T. acidophilum and T. volcanii with archaeal bifunctional KD(P)GA, NAL of E. coli, and DHDPS of E. coli. The alignment was generated with ClustalX using the gonnet matrix. Consensus patterns (DHDPS_1 and DHDPS_2) are boxed. The dihydrodipicolinate synthetase family signature 1 consensus pattern is [GSA]-[LIVM]-[LIVMFY]-x(2)-G-[ST]-[TG]-G-E-[GASNF]-x(6)-[EQ] (PS00665), and the dihydrodipicolinate synthetase family signature 2 consensus pattern is Y-[DNSAH]-[LIVMFAN]-P-x(2)-[STAV]-x(2,3)-[LIVMFT]-x(13,14)-[LIVMCF]-x-[SGA]-[LIVMFNS]-K-[DEQAFYH]-[STACI] (PS00666). Signature 2 consensus pattern includes a lysine (marked by an arrow) which is involved in Schiff base formation. Catalytic residues (▾) and residues forming a putative phosphate-binding motif (#) for KDP according to references 16, 27, and 30 are indicated. Pto-KDGA, KDGA of P. torridus; Tac-KDGA and Tvo-KDGA, homologs of Pto-KDGA in T. acidophilum and T. volcanii Ta1157 and TVN1228; Sso-KD(P)GA, S. solfataricus gi:2879782; Tte-KD(P)GA, T. tenax gi:41033593; Eco-NAL, gi:128526; Eco-DHDPS, gi:145708.

Article Snippet: Accession numbers for the proteins and enzymes from the different species are shown in parentheses as follows: for KDGA, Picrophilus torridus Pto1279, Thermoplasma volcanium GSS1 (gi:13542059) TVN1228, and Thermoplasma acidophilum DSM 1728 (gi:16082170) Ta1157; for NAL, Homo sapiens (gi:13540533), Haemophilus influenzae (Swiss Prot {"type":"entrez-protein","attrs":{"text":"P44539","term_id":"1171757","term_text":"P44539"}} P44539 ), and Escherichia coli (Swiss Prot {"type":"entrez-protein","attrs":{"text":"P06995","term_id":"1171756","term_text":"P06995"}} P06995 ); for KD(P)GA, Sulfolobus solfataricus (gi:2879782), Sulfolobus tokodaii strain 7 (gi:15922811), Sulfolobus acidocaldarius DSM 639 (gi:70606067), Thermoproteus tenax (gi:41033593), Pyrobaculum arsenaticum DSM 13514 (gi:145591599), and Metallosphaera sedula DSM 5348 (gi:146304062); for DHDPS, Methanocaldococcus jannaschii DSM 2661 (gi:15668419), Methanobrevibacter smithii ATCC 35061 (gi:148642891), Haloarcula marismortui ATCC 43049 (gi:55377124), Natronomonas pharaonis DSM 2160 (gi:76801395), Halorubrum lacusprofundi ATCC 49239 (gi:153895122), Haloquadratum walsbyi DSM 16790 (gi:110667468), Thermotoga maritima (gi:7531088), Escherichia coli (gi:145708), Nicotiana sylvestris (gi:14575543), and Mycobacterium tuberculosis AF2122/97 (gi:31793927); for proteins/enzymes not shown in groups, Halobacterium sp. NRC-1 (gi:15789685), Picrophilus torridus DSM 9790 (gi:48478098) Pto1026, Thermoplasma acidophilum DSM 1728 (gi:16081713) Ta0619, Thermoplasma volcanium GSS1 (gi:14324884), TVG0663048, and Ferroplasma acidarmanus Fer1 (gi:69268899).

Techniques: Sequencing, Generated, Binding Assay

Phylogenetic relationship of KDGA with selected members of the DHDPS-like protein family from bacteria and archaea. Characterized enzymes are underlined. The numbers at the nodes are bootstrapping values according to neighbor joining (generated by using the neighbor-joining algorithm of ClustalX). Accession numbers for the proteins and enzymes from the different species are shown in parentheses as follows: for KDGA, Picrophilus torridus Pto1279, Thermoplasma volcanium GSS1 (gi:13542059) TVN1228, and Thermoplasma acidophilum DSM 1728 (gi:16082170) Ta1157; for NAL, Homo sapiens (gi:13540533), Haemophilus influenzae (Swiss Prot P44539), and Escherichia coli (Swiss Prot P06995); for KD(P)GA, Sulfolobus solfataricus (gi:2879782), Sulfolobus tokodaii strain 7 (gi:15922811), Sulfolobus acidocaldarius DSM 639 (gi:70606067), Thermoproteus tenax (gi:41033593), Pyrobaculum arsenaticum DSM 13514 (gi:145591599), and Metallosphaera sedula DSM 5348 (gi:146304062); for DHDPS, Methanocaldococcus jannaschii DSM 2661 (gi:15668419), Methanobrevibacter smithii ATCC 35061 (gi:148642891), Haloarcula marismortui ATCC 43049 (gi:55377124), Natronomonas pharaonis DSM 2160 (gi:76801395), Halorubrum lacusprofundi ATCC 49239 (gi:153895122), Haloquadratum walsbyi DSM 16790 (gi:110667468), Thermotoga maritima (gi:7531088), Escherichia coli (gi:145708), Nicotiana sylvestris (gi:14575543), and Mycobacterium tuberculosis AF2122/97 (gi:31793927); for proteins/enzymes not shown in groups, Halobacterium sp. NRC-1 (gi:15789685), Picrophilus torridus DSM 9790 (gi:48478098) Pto1026, Thermoplasma acidophilum DSM 1728 (gi:16081713) Ta0619, Thermoplasma volcanium GSS1 (gi:14324884), TVG0663048, and Ferroplasma acidarmanus Fer1 (gi:69268899). The scale bar corresponds to 0.1 substitution per site.

Journal: Journal of Bacteriology

Article Title: The Nonphosphorylative Entner-Doudoroff Pathway in the Thermoacidophilic Euryarchaeon Picrophilus torridus Involves a Novel 2-Keto-3-Deoxygluconate- Specific Aldolase ▿

doi: 10.1128/JB.01281-09

Figure Lengend Snippet: Phylogenetic relationship of KDGA with selected members of the DHDPS-like protein family from bacteria and archaea. Characterized enzymes are underlined. The numbers at the nodes are bootstrapping values according to neighbor joining (generated by using the neighbor-joining algorithm of ClustalX). Accession numbers for the proteins and enzymes from the different species are shown in parentheses as follows: for KDGA, Picrophilus torridus Pto1279, Thermoplasma volcanium GSS1 (gi:13542059) TVN1228, and Thermoplasma acidophilum DSM 1728 (gi:16082170) Ta1157; for NAL, Homo sapiens (gi:13540533), Haemophilus influenzae (Swiss Prot P44539), and Escherichia coli (Swiss Prot P06995); for KD(P)GA, Sulfolobus solfataricus (gi:2879782), Sulfolobus tokodaii strain 7 (gi:15922811), Sulfolobus acidocaldarius DSM 639 (gi:70606067), Thermoproteus tenax (gi:41033593), Pyrobaculum arsenaticum DSM 13514 (gi:145591599), and Metallosphaera sedula DSM 5348 (gi:146304062); for DHDPS, Methanocaldococcus jannaschii DSM 2661 (gi:15668419), Methanobrevibacter smithii ATCC 35061 (gi:148642891), Haloarcula marismortui ATCC 43049 (gi:55377124), Natronomonas pharaonis DSM 2160 (gi:76801395), Halorubrum lacusprofundi ATCC 49239 (gi:153895122), Haloquadratum walsbyi DSM 16790 (gi:110667468), Thermotoga maritima (gi:7531088), Escherichia coli (gi:145708), Nicotiana sylvestris (gi:14575543), and Mycobacterium tuberculosis AF2122/97 (gi:31793927); for proteins/enzymes not shown in groups, Halobacterium sp. NRC-1 (gi:15789685), Picrophilus torridus DSM 9790 (gi:48478098) Pto1026, Thermoplasma acidophilum DSM 1728 (gi:16081713) Ta0619, Thermoplasma volcanium GSS1 (gi:14324884), TVG0663048, and Ferroplasma acidarmanus Fer1 (gi:69268899). The scale bar corresponds to 0.1 substitution per site.

Article Snippet: Accession numbers for the proteins and enzymes from the different species are shown in parentheses as follows: for KDGA, Picrophilus torridus Pto1279, Thermoplasma volcanium GSS1 (gi:13542059) TVN1228, and Thermoplasma acidophilum DSM 1728 (gi:16082170) Ta1157; for NAL, Homo sapiens (gi:13540533), Haemophilus influenzae (Swiss Prot {"type":"entrez-protein","attrs":{"text":"P44539","term_id":"1171757","term_text":"P44539"}} P44539 ), and Escherichia coli (Swiss Prot {"type":"entrez-protein","attrs":{"text":"P06995","term_id":"1171756","term_text":"P06995"}} P06995 ); for KD(P)GA, Sulfolobus solfataricus (gi:2879782), Sulfolobus tokodaii strain 7 (gi:15922811), Sulfolobus acidocaldarius DSM 639 (gi:70606067), Thermoproteus tenax (gi:41033593), Pyrobaculum arsenaticum DSM 13514 (gi:145591599), and Metallosphaera sedula DSM 5348 (gi:146304062); for DHDPS, Methanocaldococcus jannaschii DSM 2661 (gi:15668419), Methanobrevibacter smithii ATCC 35061 (gi:148642891), Haloarcula marismortui ATCC 43049 (gi:55377124), Natronomonas pharaonis DSM 2160 (gi:76801395), Halorubrum lacusprofundi ATCC 49239 (gi:153895122), Haloquadratum walsbyi DSM 16790 (gi:110667468), Thermotoga maritima (gi:7531088), Escherichia coli (gi:145708), Nicotiana sylvestris (gi:14575543), and Mycobacterium tuberculosis AF2122/97 (gi:31793927); for proteins/enzymes not shown in groups, Halobacterium sp. NRC-1 (gi:15789685), Picrophilus torridus DSM 9790 (gi:48478098) Pto1026, Thermoplasma acidophilum DSM 1728 (gi:16081713) Ta0619, Thermoplasma volcanium GSS1 (gi:14324884), TVG0663048, and Ferroplasma acidarmanus Fer1 (gi:69268899).

Techniques: Bacteria, Generated