Journal: bioRxiv

Article Title: Rapid development of cloud-native intelligent data pipelines for scientific data streams using the HASTE Toolkit

doi: 10.1101/2020.09.13.274779

Figure Lengend Snippet: Architecture of the intended application: full control loop for the MiniTEM, with automatic imaging of target areas identified in initial scan. Control of microscope acquisition is future work. The internals of the HASTE Desktop Agent (where the HASTE model is applied) are shown in .

Article Snippet: The image stream comes from MiniTEM ™ - a 25keV transmission electron microscope [ ] (Vironova, Sweden), connected to a desktop PC from which the microscope is operated and the image stream received, via proprietary driver software.

Techniques: Imaging, Microscopy

Journal: bioRxiv

Article Title: Rapid development of cloud-native intelligent data pipelines for scientific data streams using the HASTE Toolkit

doi: 10.1101/2020.09.13.274779

Figure Lengend Snippet: Image size reduction (normalized by CPU cost) over index, showing which images are processed at the edge. Those marked ‘processed’ were processed at the cloud edge prior to upload (and vice-versa) – selected either to search for new areas of high/low reduction, or to exploit known areas (using the IF). The line shows the final revision of the splines estimation of the message size reduction (the IF). Note how this deviates from the true value (measured independently for illustration purposes on the same hardware), in regions of low reduction. Note the oscillating pattern which is an artifact movement over the grid in the miniTEM. Adapted from .

Article Snippet: The image stream comes from MiniTEM ™ - a 25keV transmission electron microscope [ ] (Vironova, Sweden), connected to a desktop PC from which the microscope is operated and the image stream received, via proprietary driver software.

Techniques:

Journal: GigaScience

Article Title: Rapid development of cloud-native intelligent data pipelines for scientific data streams using the HASTE Toolkit

doi: 10.1093/gigascience/giab018

Figure Lengend Snippet: Architecture of the intended application: full control loop for the MiniTEM, with automatic imaging of target areas identified in initial scan. Control of microscope acquisition is future work. The internals of the HASTE Desktop Agent (where the HASTE model is applied) are shown in Fig. .

Article Snippet: The image stream comes from MiniTEM TM , a 25-keV TEM [ ] (Vironova, Sweden), connected to a desktop PC from which the microscope is operated and the image stream received, via proprietary driver software.

Techniques: Control, Imaging, Microscopy

Journal: GigaScience

Article Title: Rapid development of cloud-native intelligent data pipelines for scientific data streams using the HASTE Toolkit

doi: 10.1093/gigascience/giab018

Figure Lengend Snippet: Image size reduction (normalized by CPU cost) over index, showing which images are processed at the edge. Those marked "processed" were processed at the cloud edge prior to upload (and vice versa)—selected either to search for new areas of high/low reduction or to exploit known areas (using the IF). The line shows the final revision of the splines estimation of the message size reduction (the IF). Note how this deviates from the true value (measured independently for illustration purposes on the same hardware) in regions of low reduction. Note the oscillating pattern, which is an artifact of movement over the grid in the miniTEM. Adapted from .

Article Snippet: The image stream comes from MiniTEM TM , a 25-keV TEM [ ] (Vironova, Sweden), connected to a desktop PC from which the microscope is operated and the image stream received, via proprietary driver software.

Techniques: