pbmc 4k Search Results


data 303 pbmc 4k  (10X Genomics)
86
10X Genomics data 303 pbmc 4k
Data 303 Pbmc 4k, supplied by 10X Genomics, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/pbmc+4k/data+pbmc+scrna+seq/pmc06771546__giz121_giga___d___19___00138_revision_1-325-37-46
Average 86 stars, based on 1 article reviews
data 303 pbmc 4k - by Bioz Stars, 2026-10
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healthy donor  (10X Genomics)
86
10X Genomics healthy donor
Healthy Donor, supplied by 10X Genomics, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/pbmc+4k/3k+pbmcs/pmc11342777-3-9-12
Average 86 stars, based on 1 article reviews
healthy donor - by Bioz Stars, 2026-10
86/100 stars
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single cell gene expression datasets  (10X Genomics)
86
10X Genomics single cell gene expression datasets
Time-course transcriptomic profiling reveals detailed molecular events in the febrile phase of DENV infection (A) Principal Component Analysis (PCA) of overall transcriptomic patterns among the ten PBMC samples. Colors represent the time points of DENV infection; shapes represent different severities. (B) Heatmap showing the relative <t>expression</t> of highly variable <t>genes</t> (HVGs), from the union of the top 500 genes in PC1 and PC2 from (A) (see ). (C) Dotplots illustrating the relative expression of HVGs over the course of DENV infection. The biological processes (BPs) of HVGs that are common across the four <t>cell</t> types are in red; monocyte-specific BPs are in blue, and B cell-specific BPs are in green. The relative expression is indicated by the color intensity (see ). (D) UMAP feature plots of the relative signature scores of HVGs that are associated in that particular BPs (see also <xref ref-type=Figure S4 ). " width="250" height="auto" />
Single Cell Gene Expression Datasets, supplied by 10X Genomics, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/pbmc+4k/cellranger/pmc08957021-39-10-8
Average 86 stars, based on 1 article reviews
single cell gene expression datasets - by Bioz Stars, 2026-10
86/100 stars
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Image Search Results


Time-course transcriptomic profiling reveals detailed molecular events in the febrile phase of DENV infection (A) Principal Component Analysis (PCA) of overall transcriptomic patterns among the ten PBMC samples. Colors represent the time points of DENV infection; shapes represent different severities. (B) Heatmap showing the relative expression of highly variable genes (HVGs), from the union of the top 500 genes in PC1 and PC2 from (A) (see ). (C) Dotplots illustrating the relative expression of HVGs over the course of DENV infection. The biological processes (BPs) of HVGs that are common across the four cell types are in red; monocyte-specific BPs are in blue, and B cell-specific BPs are in green. The relative expression is indicated by the color intensity (see ). (D) UMAP feature plots of the relative signature scores of HVGs that are associated in that particular BPs (see also <xref ref-type=Figure S4 ). " width="100%" height="100%">

Journal: iScience

Article Title: Single-cell temporal analysis of natural dengue infection reveals skin-homing lymphocyte expansion one day before defervescence

doi: 10.1016/j.isci.2022.104034

Figure Lengend Snippet: Time-course transcriptomic profiling reveals detailed molecular events in the febrile phase of DENV infection (A) Principal Component Analysis (PCA) of overall transcriptomic patterns among the ten PBMC samples. Colors represent the time points of DENV infection; shapes represent different severities. (B) Heatmap showing the relative expression of highly variable genes (HVGs), from the union of the top 500 genes in PC1 and PC2 from (A) (see ). (C) Dotplots illustrating the relative expression of HVGs over the course of DENV infection. The biological processes (BPs) of HVGs that are common across the four cell types are in red; monocyte-specific BPs are in blue, and B cell-specific BPs are in green. The relative expression is indicated by the color intensity (see ). (D) UMAP feature plots of the relative signature scores of HVGs that are associated in that particular BPs (see also Figure S4 ).

Article Snippet: Dataset: 4k PBMCs from a healthy donor , 10x Genomics Single Cell Gene Expression Datasets , https://support.10xgenomics.com/single-cell-gene-expression/datasets/2.1.0/pbmc4k.

Techniques: Infection, Expressing

Functional characterisation of T cell subpopulations during DENV infection (A) UMAP plots of integrated T cell transcriptome profiles from the ten PBMC samples (see also <xref ref-type=Figure S6 and ). (B) Relative abundances of Effector T cells (upper panel) and Naive/Memory T cells (lower panel). (C) Relative expression of the top 20 differentially expressed genes (DEGs) between each of the subpopulations and the rest of effector-like T cells. (D) Average expression of tissue-homing genes in Effector T cells. The dot sizes represent the proportion of cells expressing the genes. (E) UMAP plots showing the Effector CD8 (upper panel) and CD4 (lower panel) T cells. Black lines represent pseudotime constructed by Monocle3 ( Cao et al., 2019 ), by setting Effector CD8-3 and Naive CD4 as roots (see also Figure S13 ). (F) Pseudotime kinetics of SELPLG , and ITGAE from the roots in Effector CD8 (upper panel) and CD4 (lower panel) T cells (see also ). The color codes for T cell subpopulations are as in (E). " width="100%" height="100%">

Journal: iScience

Article Title: Single-cell temporal analysis of natural dengue infection reveals skin-homing lymphocyte expansion one day before defervescence

doi: 10.1016/j.isci.2022.104034

Figure Lengend Snippet: Functional characterisation of T cell subpopulations during DENV infection (A) UMAP plots of integrated T cell transcriptome profiles from the ten PBMC samples (see also Figure S6 and ). (B) Relative abundances of Effector T cells (upper panel) and Naive/Memory T cells (lower panel). (C) Relative expression of the top 20 differentially expressed genes (DEGs) between each of the subpopulations and the rest of effector-like T cells. (D) Average expression of tissue-homing genes in Effector T cells. The dot sizes represent the proportion of cells expressing the genes. (E) UMAP plots showing the Effector CD8 (upper panel) and CD4 (lower panel) T cells. Black lines represent pseudotime constructed by Monocle3 ( Cao et al., 2019 ), by setting Effector CD8-3 and Naive CD4 as roots (see also Figure S13 ). (F) Pseudotime kinetics of SELPLG , and ITGAE from the roots in Effector CD8 (upper panel) and CD4 (lower panel) T cells (see also ). The color codes for T cell subpopulations are as in (E).

Article Snippet: Dataset: 4k PBMCs from a healthy donor , 10x Genomics Single Cell Gene Expression Datasets , https://support.10xgenomics.com/single-cell-gene-expression/datasets/2.1.0/pbmc4k.

Techniques: Functional Assay, Infection, Expressing, Construct

Journal: iScience

Article Title: Single-cell temporal analysis of natural dengue infection reveals skin-homing lymphocyte expansion one day before defervescence

doi: 10.1016/j.isci.2022.104034

Figure Lengend Snippet:

Article Snippet: Dataset: 4k PBMCs from a healthy donor , 10x Genomics Single Cell Gene Expression Datasets , https://support.10xgenomics.com/single-cell-gene-expression/datasets/2.1.0/pbmc4k.

Techniques: Control, Recombinant, Isolation, Saline, Sequencing, Gene Expression, Software