nov Search Results


shipworm endosymbiont teredinibacter turnerae t7902  (ATCC)
93
ATCC shipworm endosymbiont teredinibacter turnerae t7902
Synteny plot comparing the previously published genome of T. turnerae <t>T7902</t> (GCA_000379165.1) and the new genome sequence and assembly presented here (GCA_037935975.1). A MUMmer3 plot was generated with NUCmer v3.1 using default settings to assess synteny and completion. Minimum exact matches of 20bp are represented as a dot with lines representing exact match lengths >20bp. Forward matches are displayed in red, while reverse matches are shown in blue.
Shipworm Endosymbiont Teredinibacter Turnerae T7902, supplied by ATCC, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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mouse nov ccn3 duoset  (R&D Systems)
90
R&D Systems mouse nov ccn3 duoset
Synteny plot comparing the previously published genome of T. turnerae <t>T7902</t> (GCA_000379165.1) and the new genome sequence and assembly presented here (GCA_037935975.1). A MUMmer3 plot was generated with NUCmer v3.1 using default settings to assess synteny and completion. Minimum exact matches of 20bp are represented as a dot with lines representing exact match lengths >20bp. Forward matches are displayed in red, while reverse matches are shown in blue.
Mouse Nov Ccn3 Duoset, supplied by R&D Systems, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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e cloacae type strain atcc 13047  (ATCC)
99
ATCC e cloacae type strain atcc 13047
Synteny plot comparing the previously published genome of T. turnerae <t>T7902</t> (GCA_000379165.1) and the new genome sequence and assembly presented here (GCA_037935975.1). A MUMmer3 plot was generated with NUCmer v3.1 using default settings to assess synteny and completion. Minimum exact matches of 20bp are represented as a dot with lines representing exact match lengths >20bp. Forward matches are displayed in red, while reverse matches are shown in blue.
E Cloacae Type Strain Atcc 13047, supplied by ATCC, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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atcc 43961  (ATCC)
93
ATCC atcc 43961
Synteny plot comparing the previously published genome of T. turnerae <t>T7902</t> (GCA_000379165.1) and the new genome sequence and assembly presented here (GCA_037935975.1). A MUMmer3 plot was generated with NUCmer v3.1 using default settings to assess synteny and completion. Minimum exact matches of 20bp are represented as a dot with lines representing exact match lengths >20bp. Forward matches are displayed in red, while reverse matches are shown in blue.
Atcc 43961, supplied by ATCC, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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b suis bv  (ATCC)
94
ATCC b suis bv
Bacterial strains used in this study and comparison of the two conventional PCR methods
B Suis Bv, supplied by ATCC, used in various techniques. Bioz Stars score: 94/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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adamts1  (R&D Systems)
88
R&D Systems adamts1
Bacterial strains used in this study and comparison of the two conventional PCR methods
Adamts1, supplied by R&D Systems, used in various techniques. Bioz Stars score: 88/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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1640 nv 050  (R&D Systems)
93
R&D Systems 1640 nv 050
Bacterial strains used in this study and comparison of the two conventional PCR methods
1640 Nv 050, supplied by R&D Systems, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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gene exp nov hs00159631 m1  (Thermo Fisher)
93
Thermo Fisher gene exp nov hs00159631 m1
Target genes’ Assay ID information for RT-qPCR.
Gene Exp Nov Hs00159631 M1, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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enterobacter cloacae  (ATCC)
94
ATCC enterobacter cloacae
Target genes’ Assay ID information for RT-qPCR.
Enterobacter Cloacae, supplied by ATCC, used in various techniques. Bioz Stars score: 94/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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enterobacter cloacae atcc 35587  (ATCC)
94
ATCC enterobacter cloacae atcc 35587
Target genes’ Assay ID information for RT-qPCR.
Enterobacter Cloacae Atcc 35587, supplied by ATCC, used in various techniques. Bioz Stars score: 94/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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nov  (R&D Systems)
93
R&D Systems nov
Target genes’ Assay ID information for RT-qPCR.
Nov, supplied by R&D Systems, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Image Search Results


Synteny plot comparing the previously published genome of T. turnerae T7902 (GCA_000379165.1) and the new genome sequence and assembly presented here (GCA_037935975.1). A MUMmer3 plot was generated with NUCmer v3.1 using default settings to assess synteny and completion. Minimum exact matches of 20bp are represented as a dot with lines representing exact match lengths >20bp. Forward matches are displayed in red, while reverse matches are shown in blue.

Journal: bioRxiv

Article Title: Closing the genome of Teredinibacter turnerae T7902 by long-read nanopore sequencing

doi: 10.1101/2024.07.30.605897

Figure Lengend Snippet: Synteny plot comparing the previously published genome of T. turnerae T7902 (GCA_000379165.1) and the new genome sequence and assembly presented here (GCA_037935975.1). A MUMmer3 plot was generated with NUCmer v3.1 using default settings to assess synteny and completion. Minimum exact matches of 20bp are represented as a dot with lines representing exact match lengths >20bp. Forward matches are displayed in red, while reverse matches are shown in blue.

Article Snippet: We present the complete closed circular genome sequence derived from Oxford Nanopore sequencing of the shipworm endosymbiont Teredinibacter turnerae T7902 (DSM 15152, ATCC 39867), originally isolated from the shipworm Lyrodus pedicellatus ( ).

Techniques: Sequencing, Generated

Bacterial strains used in this study and comparison of the two conventional PCR methods

Journal: The Journal of Veterinary Medical Science

Article Title: Differential diagnosis of Brucella abortus by real-time PCR based on a single-nucleotide polymorphisms

doi: 10.1292/jvms.15-0541

Figure Lengend Snippet: Bacterial strains used in this study and comparison of the two conventional PCR methods

Article Snippet: , B. suis bv. 1 (1330) , ATCC 23444 , + , ± , –.

Techniques: Comparison

Target genes’ Assay ID information for RT-qPCR.

Journal: Applied sciences (Basel, Switzerland)

Article Title: Hypoxia Modulates Regenerative Potential of Fetal Stem Cells

doi: 10.3390/app12010363

Figure Lengend Snippet: Target genes’ Assay ID information for RT-qPCR.

Article Snippet: NOV , Nephroblastoma overexpressed , Hs00159631_m1.

Techniques:

Evaluation of stemness gene expression, proliferation potential, and surface marker expression in fetal cells following either normoxia (N) or hypoxia (L) incubation. ( A ) Fetal NPC and SDSC cell morphology during expansion. ( B ) RT-qPCR assessed the expression of stemness genes ( MYC , KLF4 , BMI1 , POU5F1 , NES , NOV , NANOG , and SOX2 ) in both fetal cell types after hypoxia treatment, normalized against GAPDH levels as an internal control. Data ( n = 4) are represented in bar charts. Different letters indicate a statistically significant difference compared to the groups within the same gene type ( p < 0.05). Flow cytometry assessed the positive percentage and median intensity of relative EdU incorporation ( C ) and expression of MSC surface markers SSEA4 ( D ), CD73 ( E ), CD90 ( F ), CD105 ( G ), and CD146 ( H ).

Journal: Applied sciences (Basel, Switzerland)

Article Title: Hypoxia Modulates Regenerative Potential of Fetal Stem Cells

doi: 10.3390/app12010363

Figure Lengend Snippet: Evaluation of stemness gene expression, proliferation potential, and surface marker expression in fetal cells following either normoxia (N) or hypoxia (L) incubation. ( A ) Fetal NPC and SDSC cell morphology during expansion. ( B ) RT-qPCR assessed the expression of stemness genes ( MYC , KLF4 , BMI1 , POU5F1 , NES , NOV , NANOG , and SOX2 ) in both fetal cell types after hypoxia treatment, normalized against GAPDH levels as an internal control. Data ( n = 4) are represented in bar charts. Different letters indicate a statistically significant difference compared to the groups within the same gene type ( p < 0.05). Flow cytometry assessed the positive percentage and median intensity of relative EdU incorporation ( C ) and expression of MSC surface markers SSEA4 ( D ), CD73 ( E ), CD90 ( F ), CD105 ( G ), and CD146 ( H ).

Article Snippet: NOV , Nephroblastoma overexpressed , Hs00159631_m1.

Techniques: Gene Expression, Marker, Expressing, Incubation, Quantitative RT-PCR, Control, Flow Cytometry