Journal: Biological Imaging

Article Title: Performant web-based interactive visualization tool for spatially-resolved transcriptomics experiments

doi: 10.1017/S2633903X2300017X

Figure Lengend Snippet: Visualizing and annotating multi-dimensional images in Samui. A user can easily interact with and annotate spatial coordinates on top of multidimensional images with data such as from the (a) 10x Genomics Visium Spatial Gene Expression platform or (b) Vizgen MERFISH platform.

Article Snippet: A user can easily interact with and annotate spatial coordinates on top of multidimensional images with data such as from the (a) 10x Genomics Visium Spatial Gene Expression platform or (b) Vizgen MERFISH platform.

Techniques: Expressing

Journal: Cancers

Article Title: Cutting-Edge Platforms for Analysis of Immune Cells in the Hepatic Microenvironment—Focus on Tumor-Associated Macrophages in Hepatocellular Carcinoma

doi: 10.3390/cancers14081861

Figure Lengend Snippet: Summary of strengths, weakness, opportunities, and threats for each platform.

Article Snippet: These technologies, such as multispectral imaging (e.g., Vectra Polaris), mass cytometry by time-of-flight (e.g., Fluidigm CyTOF), cycling of fluorochromes (e.g., Akoya Biosciences CODEX/PhenoCycler-Fusion, Bruker Canopy, Lunaphore Comet, and CyCIF) and digital spatial profiling or transcriptomics (e.g., GeoMx or Visium, Vizgen Merscope) are being utilized to accurately assess the complex cellular network within the tissue microenvironment.

Techniques: In Situ, Preserving, Biomarker Discovery, High Throughput Screening Assay, Microscopy, Expressing, Blocking Assay, Gene Expression, Cell Isolation