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Wormlab, supplied by MBF Bioscience, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Journal: Developmental cell

Article Title: Casein kinase 1δ stabilizes mature axons by inhibiting transcription termination of Ankyrin

doi: 10.1016/j.devcel.2019.12.005

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Article Snippet: For a full list of strains and mutations used in this work, see . table ft1 table-wrap mode="anchored" t5 caption a7 REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies N/A Bacterial and Virus Strains BL21 Lab stock TOP 10 Lab stock Biological Samples N/A Chemicals, Peptides, and Recombinant Proteins CK1 delta NEB P6030 Critical Commercial Assays N/A Deposited Data N/A Experimental Models: Cell Lines N/A Experimental Models: Organisms/Strains See KEY RESOURCES TABLE Oligonucleotides See KEY RESOURCES TABLE Recombinant DNA N/A Software and Algorithms SNP filtering This paper: https://github.com/jorgensenlab/WGS-variant-filtering GraphPad prism https://www.graphpad.com/scientific-software/prism/ STAR aligner https://github.com/alexdobin/STAR DESeq2 https://bioconductor.org/packages/release/bioc/html/DESeq2.html DEXseq https://bioconductor.org/packages/release/bioc/html/DEXSeq.html Burrows-Wheeler Aligner http://bio-bwa.sourceforge.net/ Unified genotyper GATK https://software.broadinstitute.org/gatk/documentation/tooldocs/3.8–0/org_broadinstitute_gatk_tools_walkers_genotyper_UnifiedGenotyper.php SNPEff http://snpeff.sourceforge.net/ ApE A plasmid Editor https://jorgensen.biology.utah.edu/wayned/ape/ Fiji – Fiji is just imageJ https://fiji.sc/ SapTrap builder https://www.micropublication.org/journals/biology/m4qq-2x02/ Primer3Plus http://www.bioinformatics.nl/cgi-bin/primer3plus/primer3plus.cgi WormLab https://www.mbfbioscience.com/wormlab Vutara SRX https://www.bruker.com/products/fluorescence-microscopes/vutara-super-resolution-microscopy/overview/srx-software-vutara-super-resolution.html Zeiss LSM5 Pascal No longer supported Zeiss LSM510 No longer supported Zeiss ZEN black https://www.zeiss.com/microscopy/us/products/microscope-software/zen-lite.html Nikon I series https://www.nikon.com/products/microscope-solutions/support/download/software/biological/90i_v24432.htm Other Open in a separate window KEY RESOURCES TABLE kin-20(ox423) and wild-type axon quantification C. elegans hermaphrodites were immobilized for microscopy on a 2% agarose pad in M9 + 25mM sodium azide solution on a glass slide.

Techniques: Recombinant, Software, Plasmid Preparation