bulk rnaseq data Search Results


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ATCC data bulk rnaseq sra
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Biotechnology Information gene expression omnibus database
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ATCC paper arrayexpress e mtab 14013 bulk rnaseq data
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Human Protein Atlas bulk rnaseq data
Bulk Rnaseq Data, supplied by Human Protein Atlas, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Human Protein Atlas single cell rnaseq data
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Allen Institute for Brain Science bulk rnaseq data set
Bulk Rnaseq Data Set, supplied by Allen Institute for Brain Science, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Biotechnology Information bulk rnaseq data
Bulk Rnaseq Data, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Broad Clinical Labs bulk rna seq pipeline
Overview of the study design. A, Cell fraction was calculated from 2457 <t>bulk</t> <t>RNA‐seq</t> samples from among three brain regions (AC, DLPFC, PCC) in the ROSMAP cohort using the DeTREM algorithm. B, Cell fractions in the remaining samples were compared to diagnostic categories and clinicopathological traits. C, Cell‐fraction quantitative trait locus analysis in samples with WGS data. AC, anterior caudate; AD, Alzheimer's disease; AST, astrocytes; DLPFC, dorsolateral prefrontal cortex; END, endothelial cells; MIC, microglia; ODC, oligodendrocytes; OPC, oligodendrocyte precursors; PCC, posterior cingulate cortex; ROSMAP, Religious Orders Study and Rush Memory and Aging Project; SWDBB, South West Dementia Brain Bank; WGS, whole genome sequencing.
Bulk Rna Seq Pipeline, supplied by Broad Clinical Labs, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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86
Mendeley Ltd bulk rnaseq data
Overview of the study design. A, Cell fraction was calculated from 2457 <t>bulk</t> <t>RNA‐seq</t> samples from among three brain regions (AC, DLPFC, PCC) in the ROSMAP cohort using the DeTREM algorithm. B, Cell fractions in the remaining samples were compared to diagnostic categories and clinicopathological traits. C, Cell‐fraction quantitative trait locus analysis in samples with WGS data. AC, anterior caudate; AD, Alzheimer's disease; AST, astrocytes; DLPFC, dorsolateral prefrontal cortex; END, endothelial cells; MIC, microglia; ODC, oligodendrocytes; OPC, oligodendrocyte precursors; PCC, posterior cingulate cortex; ROSMAP, Religious Orders Study and Rush Memory and Aging Project; SWDBB, South West Dementia Brain Bank; WGS, whole genome sequencing.
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Image Search Results


Overview of the study design. A, Cell fraction was calculated from 2457 bulk RNA‐seq samples from among three brain regions (AC, DLPFC, PCC) in the ROSMAP cohort using the DeTREM algorithm. B, Cell fractions in the remaining samples were compared to diagnostic categories and clinicopathological traits. C, Cell‐fraction quantitative trait locus analysis in samples with WGS data. AC, anterior caudate; AD, Alzheimer's disease; AST, astrocytes; DLPFC, dorsolateral prefrontal cortex; END, endothelial cells; MIC, microglia; ODC, oligodendrocytes; OPC, oligodendrocyte precursors; PCC, posterior cingulate cortex; ROSMAP, Religious Orders Study and Rush Memory and Aging Project; SWDBB, South West Dementia Brain Bank; WGS, whole genome sequencing.

Journal: Alzheimer's & Dementia

Article Title: Cognitive resilience to Alzheimer's disease characterized by cell‐type abundance

doi: 10.1002/alz.14187

Figure Lengend Snippet: Overview of the study design. A, Cell fraction was calculated from 2457 bulk RNA‐seq samples from among three brain regions (AC, DLPFC, PCC) in the ROSMAP cohort using the DeTREM algorithm. B, Cell fractions in the remaining samples were compared to diagnostic categories and clinicopathological traits. C, Cell‐fraction quantitative trait locus analysis in samples with WGS data. AC, anterior caudate; AD, Alzheimer's disease; AST, astrocytes; DLPFC, dorsolateral prefrontal cortex; END, endothelial cells; MIC, microglia; ODC, oligodendrocytes; OPC, oligodendrocyte precursors; PCC, posterior cingulate cortex; ROSMAP, Religious Orders Study and Rush Memory and Aging Project; SWDBB, South West Dementia Brain Bank; WGS, whole genome sequencing.

Article Snippet: Data were preprocessed and analyzed using the TOPMed bulk RNA‐seq pipeline ( https://github.com/broadinstitute/gtex‐pipeline/blob/master/TOPMed_RNAseq_pipeline.md ).

Techniques: RNA Sequencing, Diagnostic Assay, Sequencing