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Gold Biotechnology Inc thiogalactopyranoside iptg
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Thermo Fisher cryo em map
A. Representative micrograph of negatively stained T4P Mx . Scale bar, 200nm. B. Representative <t>cryo-EM</t> micrograph of T4P Mx . Scale bar, 500nm. C. Comparison of cryo-EM reconstructions of T4P and ribbon models of pilins from M. xanthus (left), N. gonorrhoeae (center), and the 2-chain G. sulfurreducens (right), where the transparent surfaces are the cryo-EM density maps, and one pilin subunit is shown in red in each. D. Cross section of the cryo-EM reconstruction of the T4P Mx with a single PilA subunit shown in red. E. Placement of the T4P Mx structure into the central slice of the subtomogram average of the piliated M. xanthus T4PM revealed by cryo-electron tomography . The T4P, the outer membrane pore (OM pore), OM, and IM are indicated. Scale bar, 10nm. F. Complete T4P Mx structure composed of T4P Mx and a tip complex. The top PilA of the T4P Mx is shown in red and PilA subunits of T4P Mx below are shown in yellow, the AlphaFold-Multimer model containing the four minor pilins (FimU3, PilV3, PilW3, PilX3) and PilY1.3 is shown in the indicated colors. The complete T4P Mx structure was generated by superposing the top PilA (red) of the T4P Mx with the bottom PilA (wheat) of the AlphaFold-Multimer model (RMSD=0.841, Fig.S2E). The superposed PilA from the AlphaFold-Multimer model is not shown in the complete T4P Mx structure.
Cryo Em Map, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 94/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Thermo Fisher β nicotinamide adenine dinucleotide nadh
A. Representative micrograph of negatively stained T4P Mx . Scale bar, 200nm. B. Representative <t>cryo-EM</t> micrograph of T4P Mx . Scale bar, 500nm. C. Comparison of cryo-EM reconstructions of T4P and ribbon models of pilins from M. xanthus (left), N. gonorrhoeae (center), and the 2-chain G. sulfurreducens (right), where the transparent surfaces are the cryo-EM density maps, and one pilin subunit is shown in red in each. D. Cross section of the cryo-EM reconstruction of the T4P Mx with a single PilA subunit shown in red. E. Placement of the T4P Mx structure into the central slice of the subtomogram average of the piliated M. xanthus T4PM revealed by cryo-electron tomography . The T4P, the outer membrane pore (OM pore), OM, and IM are indicated. Scale bar, 10nm. F. Complete T4P Mx structure composed of T4P Mx and a tip complex. The top PilA of the T4P Mx is shown in red and PilA subunits of T4P Mx below are shown in yellow, the AlphaFold-Multimer model containing the four minor pilins (FimU3, PilV3, PilW3, PilX3) and PilY1.3 is shown in the indicated colors. The complete T4P Mx structure was generated by superposing the top PilA (red) of the T4P Mx with the bottom PilA (wheat) of the AlphaFold-Multimer model (RMSD=0.841, Fig.S2E). The superposed PilA from the AlphaFold-Multimer model is not shown in the complete T4P Mx structure.
β Nicotinamide Adenine Dinucleotide Nadh, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 94/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Santa Cruz Biotechnology pi 3 kinase
A. Representative micrograph of negatively stained T4P Mx . Scale bar, 200nm. B. Representative <t>cryo-EM</t> micrograph of T4P Mx . Scale bar, 500nm. C. Comparison of cryo-EM reconstructions of T4P and ribbon models of pilins from M. xanthus (left), N. gonorrhoeae (center), and the 2-chain G. sulfurreducens (right), where the transparent surfaces are the cryo-EM density maps, and one pilin subunit is shown in red in each. D. Cross section of the cryo-EM reconstruction of the T4P Mx with a single PilA subunit shown in red. E. Placement of the T4P Mx structure into the central slice of the subtomogram average of the piliated M. xanthus T4PM revealed by cryo-electron tomography . The T4P, the outer membrane pore (OM pore), OM, and IM are indicated. Scale bar, 10nm. F. Complete T4P Mx structure composed of T4P Mx and a tip complex. The top PilA of the T4P Mx is shown in red and PilA subunits of T4P Mx below are shown in yellow, the AlphaFold-Multimer model containing the four minor pilins (FimU3, PilV3, PilW3, PilX3) and PilY1.3 is shown in the indicated colors. The complete T4P Mx structure was generated by superposing the top PilA (red) of the T4P Mx with the bottom PilA (wheat) of the AlphaFold-Multimer model (RMSD=0.841, Fig.S2E). The superposed PilA from the AlphaFold-Multimer model is not shown in the complete T4P Mx structure.
Pi 3 Kinase, supplied by Santa Cruz Biotechnology, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Bio-Rad monoclonal anti tgf b1 antibody
A. Representative micrograph of negatively stained T4P Mx . Scale bar, 200nm. B. Representative <t>cryo-EM</t> micrograph of T4P Mx . Scale bar, 500nm. C. Comparison of cryo-EM reconstructions of T4P and ribbon models of pilins from M. xanthus (left), N. gonorrhoeae (center), and the 2-chain G. sulfurreducens (right), where the transparent surfaces are the cryo-EM density maps, and one pilin subunit is shown in red in each. D. Cross section of the cryo-EM reconstruction of the T4P Mx with a single PilA subunit shown in red. E. Placement of the T4P Mx structure into the central slice of the subtomogram average of the piliated M. xanthus T4PM revealed by cryo-electron tomography . The T4P, the outer membrane pore (OM pore), OM, and IM are indicated. Scale bar, 10nm. F. Complete T4P Mx structure composed of T4P Mx and a tip complex. The top PilA of the T4P Mx is shown in red and PilA subunits of T4P Mx below are shown in yellow, the AlphaFold-Multimer model containing the four minor pilins (FimU3, PilV3, PilW3, PilX3) and PilY1.3 is shown in the indicated colors. The complete T4P Mx structure was generated by superposing the top PilA (red) of the T4P Mx with the bottom PilA (wheat) of the AlphaFold-Multimer model (RMSD=0.841, Fig.S2E). The superposed PilA from the AlphaFold-Multimer model is not shown in the complete T4P Mx structure.
Monoclonal Anti Tgf B1 Antibody, supplied by Bio-Rad, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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MedChemExpress l mercaptoethanol l mce
A. Representative micrograph of negatively stained T4P Mx . Scale bar, 200nm. B. Representative <t>cryo-EM</t> micrograph of T4P Mx . Scale bar, 500nm. C. Comparison of cryo-EM reconstructions of T4P and ribbon models of pilins from M. xanthus (left), N. gonorrhoeae (center), and the 2-chain G. sulfurreducens (right), where the transparent surfaces are the cryo-EM density maps, and one pilin subunit is shown in red in each. D. Cross section of the cryo-EM reconstruction of the T4P Mx with a single PilA subunit shown in red. E. Placement of the T4P Mx structure into the central slice of the subtomogram average of the piliated M. xanthus T4PM revealed by cryo-electron tomography . The T4P, the outer membrane pore (OM pore), OM, and IM are indicated. Scale bar, 10nm. F. Complete T4P Mx structure composed of T4P Mx and a tip complex. The top PilA of the T4P Mx is shown in red and PilA subunits of T4P Mx below are shown in yellow, the AlphaFold-Multimer model containing the four minor pilins (FimU3, PilV3, PilW3, PilX3) and PilY1.3 is shown in the indicated colors. The complete T4P Mx structure was generated by superposing the top PilA (red) of the T4P Mx with the bottom PilA (wheat) of the AlphaFold-Multimer model (RMSD=0.841, Fig.S2E). The superposed PilA from the AlphaFold-Multimer model is not shown in the complete T4P Mx structure.
L Mercaptoethanol L Mce, supplied by MedChemExpress, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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GORYO Chemical tokyogreen β glcu
A. Representative micrograph of negatively stained T4P Mx . Scale bar, 200nm. B. Representative <t>cryo-EM</t> micrograph of T4P Mx . Scale bar, 500nm. C. Comparison of cryo-EM reconstructions of T4P and ribbon models of pilins from M. xanthus (left), N. gonorrhoeae (center), and the 2-chain G. sulfurreducens (right), where the transparent surfaces are the cryo-EM density maps, and one pilin subunit is shown in red in each. D. Cross section of the cryo-EM reconstruction of the T4P Mx with a single PilA subunit shown in red. E. Placement of the T4P Mx structure into the central slice of the subtomogram average of the piliated M. xanthus T4PM revealed by cryo-electron tomography . The T4P, the outer membrane pore (OM pore), OM, and IM are indicated. Scale bar, 10nm. F. Complete T4P Mx structure composed of T4P Mx and a tip complex. The top PilA of the T4P Mx is shown in red and PilA subunits of T4P Mx below are shown in yellow, the AlphaFold-Multimer model containing the four minor pilins (FimU3, PilV3, PilW3, PilX3) and PilY1.3 is shown in the indicated colors. The complete T4P Mx structure was generated by superposing the top PilA (red) of the T4P Mx with the bottom PilA (wheat) of the AlphaFold-Multimer model (RMSD=0.841, Fig.S2E). The superposed PilA from the AlphaFold-Multimer model is not shown in the complete T4P Mx structure.
Tokyogreen β Glcu, supplied by GORYO Chemical, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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94
New England Biolabs t4 bgt
A. Representative micrograph of negatively stained T4P Mx . Scale bar, 200nm. B. Representative <t>cryo-EM</t> micrograph of T4P Mx . Scale bar, 500nm. C. Comparison of cryo-EM reconstructions of T4P and ribbon models of pilins from M. xanthus (left), N. gonorrhoeae (center), and the 2-chain G. sulfurreducens (right), where the transparent surfaces are the cryo-EM density maps, and one pilin subunit is shown in red in each. D. Cross section of the cryo-EM reconstruction of the T4P Mx with a single PilA subunit shown in red. E. Placement of the T4P Mx structure into the central slice of the subtomogram average of the piliated M. xanthus T4PM revealed by cryo-electron tomography . The T4P, the outer membrane pore (OM pore), OM, and IM are indicated. Scale bar, 10nm. F. Complete T4P Mx structure composed of T4P Mx and a tip complex. The top PilA of the T4P Mx is shown in red and PilA subunits of T4P Mx below are shown in yellow, the AlphaFold-Multimer model containing the four minor pilins (FimU3, PilV3, PilW3, PilX3) and PilY1.3 is shown in the indicated colors. The complete T4P Mx structure was generated by superposing the top PilA (red) of the T4P Mx with the bottom PilA (wheat) of the AlphaFold-Multimer model (RMSD=0.841, Fig.S2E). The superposed PilA from the AlphaFold-Multimer model is not shown in the complete T4P Mx structure.
T4 Bgt, supplied by New England Biolabs, used in various techniques. Bioz Stars score: 94/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Cell Signaling Technology Inc actin
A. Representative micrograph of negatively stained T4P Mx . Scale bar, 200nm. B. Representative <t>cryo-EM</t> micrograph of T4P Mx . Scale bar, 500nm. C. Comparison of cryo-EM reconstructions of T4P and ribbon models of pilins from M. xanthus (left), N. gonorrhoeae (center), and the 2-chain G. sulfurreducens (right), where the transparent surfaces are the cryo-EM density maps, and one pilin subunit is shown in red in each. D. Cross section of the cryo-EM reconstruction of the T4P Mx with a single PilA subunit shown in red. E. Placement of the T4P Mx structure into the central slice of the subtomogram average of the piliated M. xanthus T4PM revealed by cryo-electron tomography . The T4P, the outer membrane pore (OM pore), OM, and IM are indicated. Scale bar, 10nm. F. Complete T4P Mx structure composed of T4P Mx and a tip complex. The top PilA of the T4P Mx is shown in red and PilA subunits of T4P Mx below are shown in yellow, the AlphaFold-Multimer model containing the four minor pilins (FimU3, PilV3, PilW3, PilX3) and PilY1.3 is shown in the indicated colors. The complete T4P Mx structure was generated by superposing the top PilA (red) of the T4P Mx with the bottom PilA (wheat) of the AlphaFold-Multimer model (RMSD=0.841, Fig.S2E). The superposed PilA from the AlphaFold-Multimer model is not shown in the complete T4P Mx structure.
Actin, supplied by Cell Signaling Technology Inc, used in various techniques. Bioz Stars score: 98/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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86
European Directorate for the Quality of Medicines and HealthCare european pharmacopoeia
A. Representative micrograph of negatively stained T4P Mx . Scale bar, 200nm. B. Representative <t>cryo-EM</t> micrograph of T4P Mx . Scale bar, 500nm. C. Comparison of cryo-EM reconstructions of T4P and ribbon models of pilins from M. xanthus (left), N. gonorrhoeae (center), and the 2-chain G. sulfurreducens (right), where the transparent surfaces are the cryo-EM density maps, and one pilin subunit is shown in red in each. D. Cross section of the cryo-EM reconstruction of the T4P Mx with a single PilA subunit shown in red. E. Placement of the T4P Mx structure into the central slice of the subtomogram average of the piliated M. xanthus T4PM revealed by cryo-electron tomography . The T4P, the outer membrane pore (OM pore), OM, and IM are indicated. Scale bar, 10nm. F. Complete T4P Mx structure composed of T4P Mx and a tip complex. The top PilA of the T4P Mx is shown in red and PilA subunits of T4P Mx below are shown in yellow, the AlphaFold-Multimer model containing the four minor pilins (FimU3, PilV3, PilW3, PilX3) and PilY1.3 is shown in the indicated colors. The complete T4P Mx structure was generated by superposing the top PilA (red) of the T4P Mx with the bottom PilA (wheat) of the AlphaFold-Multimer model (RMSD=0.841, Fig.S2E). The superposed PilA from the AlphaFold-Multimer model is not shown in the complete T4P Mx structure.
European Pharmacopoeia, supplied by European Directorate for the Quality of Medicines and HealthCare, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Image Search Results


A. Representative micrograph of negatively stained T4P Mx . Scale bar, 200nm. B. Representative cryo-EM micrograph of T4P Mx . Scale bar, 500nm. C. Comparison of cryo-EM reconstructions of T4P and ribbon models of pilins from M. xanthus (left), N. gonorrhoeae (center), and the 2-chain G. sulfurreducens (right), where the transparent surfaces are the cryo-EM density maps, and one pilin subunit is shown in red in each. D. Cross section of the cryo-EM reconstruction of the T4P Mx with a single PilA subunit shown in red. E. Placement of the T4P Mx structure into the central slice of the subtomogram average of the piliated M. xanthus T4PM revealed by cryo-electron tomography . The T4P, the outer membrane pore (OM pore), OM, and IM are indicated. Scale bar, 10nm. F. Complete T4P Mx structure composed of T4P Mx and a tip complex. The top PilA of the T4P Mx is shown in red and PilA subunits of T4P Mx below are shown in yellow, the AlphaFold-Multimer model containing the four minor pilins (FimU3, PilV3, PilW3, PilX3) and PilY1.3 is shown in the indicated colors. The complete T4P Mx structure was generated by superposing the top PilA (red) of the T4P Mx with the bottom PilA (wheat) of the AlphaFold-Multimer model (RMSD=0.841, Fig.S2E). The superposed PilA from the AlphaFold-Multimer model is not shown in the complete T4P Mx structure.

Journal: bioRxiv

Article Title: Large pilin subunits provide distinct structural and mechanical properties for the Myxococcus xanthus type IV pilus

doi: 10.1101/2023.07.22.550172

Figure Lengend Snippet: A. Representative micrograph of negatively stained T4P Mx . Scale bar, 200nm. B. Representative cryo-EM micrograph of T4P Mx . Scale bar, 500nm. C. Comparison of cryo-EM reconstructions of T4P and ribbon models of pilins from M. xanthus (left), N. gonorrhoeae (center), and the 2-chain G. sulfurreducens (right), where the transparent surfaces are the cryo-EM density maps, and one pilin subunit is shown in red in each. D. Cross section of the cryo-EM reconstruction of the T4P Mx with a single PilA subunit shown in red. E. Placement of the T4P Mx structure into the central slice of the subtomogram average of the piliated M. xanthus T4PM revealed by cryo-electron tomography . The T4P, the outer membrane pore (OM pore), OM, and IM are indicated. Scale bar, 10nm. F. Complete T4P Mx structure composed of T4P Mx and a tip complex. The top PilA of the T4P Mx is shown in red and PilA subunits of T4P Mx below are shown in yellow, the AlphaFold-Multimer model containing the four minor pilins (FimU3, PilV3, PilW3, PilX3) and PilY1.3 is shown in the indicated colors. The complete T4P Mx structure was generated by superposing the top PilA (red) of the T4P Mx with the bottom PilA (wheat) of the AlphaFold-Multimer model (RMSD=0.841, Fig.S2E). The superposed PilA from the AlphaFold-Multimer model is not shown in the complete T4P Mx structure.

Article Snippet: The corresponding cryo-EM map was deposited in the EMDB with accession code EMD-41298.

Techniques: Staining, Cryo-EM Sample Prep, Tomography, Generated